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  • Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories.
    We investigated to what extent this holds true for leaf growth variables, metabolite and transcriptome profiles of three Arabidopsis...
    Plant Physiol : (2010)
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  • Next Generation Molecular Ecology
    Mol Ecol 19:1 (2010)
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  • Genome-wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies.
    We use genetically mapped SNP markers to comprehensively survey genetic variation within and among naturally occurring guppy populat...
    Mol Ecol : (2010)
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  • Transcriptional control of gene expression by microRNAs.
    We show here that in moss Physcomitrella patens mutants without a DICER-LIKE1b gene, maturation of miRNAs is normal but cleavage of...
    Cell 140:111 (2010)
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  • The Scale of Population Structure in Arabidopsis thaliana.
    We show that while A. thaliana as a species self-fertilizes 97% of the time, there is considerable variation among local groups. Thi...
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  • The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana.
    We have searched for de novo spontaneous mutations in the complete nuclear genomes of five Arabidopsis thaliana mutation accumulatio...
    Science 327:92 (2010)
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  • Control of cell proliferation in Arabidopsis thaliana by microRNA miR396.
    We describe the role of microRNA miR396 in the coordination of cell proliferation in Arabidopsis leaves. In leaf primordia, miR396 i...
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  • Small RNAs in flower development.
    We provide an overview about generation and action of miRNAs and other small RNAs, and their contribution to an important developmen...
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  • Directed gene silencing with artificial microRNAs.
    The characterization of gene function typically includes a detailed analysis of loss-of-function alleles. In model plants, such as A...
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  • Transient assays for the analysis of miRNA processing and function.
    We describe here a protocol for analysis of miRNA processing using agroinfiltration of N. benthamiana leaves....
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  • Structure Determinants for Accurate Processing of miR172a in Arabidopsis thaliana.
    We have performed an extensive in vivo structure-function analysis of Arabidopsis thaliana pri-miRNA 172a (pri-miR172a). A junction...
    Curr Biol 20:42 (2009)
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  • Selective epigenetic control of retrotransposition in Arabidopsis.
    We show that a copia-type retrotransposon (Evadé, French for 'fugitive') evaded suppression of its movement during inbreeding of...
    Nature 461:427 (2009)
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  • Deep sequencing to reveal new variants in pooled DNA samples.
    We evaluated massive parallel sequencing and long-range PCR (LRP) for rare variant detection and allele frequency estimation in pool...
    Human Mutation : (2009)
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  • miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana.
    We reveal that microRNA156-targeted SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes not only act downstream of FT/FD, but also de...
    Cell 138:738 (2009)
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  • The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis.
    We describe the regulatory mechanism of this transition. We show that miR156 is necessary and sufficient for the expression of the j...
    Cell 138:750 (2009)
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  • Genomewide SNP variation reveals relationships among landraces and modern varieties of rice.
    We used resequencing microarrays to interrogate 100 Mb of the unique fraction of the reference genome for 20 diverse varieties and l...
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  • SHOREmap: simultaneous mapping and mutation identification by deep sequencing.
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  • Cis-regulatory Changes at FLOWERING LOCUS T Mediate Natural Variation in Flowering Responses of Arabidopsis thaliana
    We show that a QTL tightly linked to FT contributes to natural variation in the flowering response to the combined effects of photop...
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  • Phenotypic analysis of Arabidopsis mutants: bacterial pathogens.
    INTRODUCTION The most commonly used bacterial pathogen of Arabidopsis is Pseudomonas syringae, pathovar tomato strain DC3000 or path...
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  • Genetic linkage map of the guppy, Poecilia reticulata, and quantitative trait loci analysis of male size and colour variation.
    We report construction of a genetic linkage map of the guppy genome using 790 single nucleotide polymorphism markers, integrated fro...
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