Latest papers

ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads.

Analysis of DNA methylation in various swine tissues.

Quantitative trait loci involved in sex determination and body growth in the gilthead sea bream (Sparus aurata L.) through targeted genome scan.

IS-linked movement of a restriction-modification system.

The accumulation of gene regulation through time.

Origins of adaptive immunity.

Using regulatory and epistatic networks to extend the findings of a genome scan: identifying the gene drivers of pigmentation in merino sheep.

Nonsynonymous substitution rate (Ka) is a relatively consistent parameter for defining fast-evolving and slow-evolving protein-coding genes.

Beyond biodiversity: fish metagenomes.

Comparative Transcriptomics of Eastern African Cichlid Fishes Shows Signs of Positive Selection and a Large Contribution of Untranslated Regions to Genetic Diversity

The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics.

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences.

rnaSeqMap: a Bioconductor package for RNA sequencing data exploration. LID - 10.1186/1471-2105-12-200 [doi]

The transcription elongation factor Bur1-Bur2 interacts with replication protein A and maintains genome stability during replication stress.

Fossil genome reveals ancestral link.

Molecular cytogenetic characterization of the genome organization of the 6-banded armadillo (Euphractus sexcinctus).

Genome-wide comparative chromosome map between human and the Forrest's pika (Ochotona forresti) established by cross-species chromosome painting: further support for the Glires hypothesis.

A site-specific genomic integration strategy for sustained expression of glucagon-like peptide-1 in mouse muscle for controlling energy homeostasis.

Plant science. Genome evolution in plant pathogens.

Evolution of domain promiscuity in eukaryotic genomes--a perspective from the inferred ancestral domain architectures.